Publications

2019

 

Fourmaux, S; Hallin, E; Arnison, PG; Kieffer, JC. 2019. Optimization of laser-based synchrotron X-rays for plant imaging. Applied Physics B 125: 33-42. Article

 

Melo JO, Martins LGC, Barros BA, Pimenta MR, Lana UGP, Duarte CEM, Pastina MM, Guimaraes CT, Schaffert RE, Fontes EPB, Kochian LV, Magalhaes JV. 2019. Repeat variants for the SbMATE transporter protect sorghum roots from aluminum toxicity by transcriptional interplay in cis and trans. Proceedings of the National Academy of Sciences of the USA 116: 313-318. Article

 

Qin L, Walk TC, Han P, Chen L, Zhang S, Li Y, Hu X, Xie L, Yang Y, Liu J, Lu X, Yu C, Tian J, Shaff JE, Kochian LV, Liao X, Liao H. 2019. Adaption of roots to nitrogen deficiency revealed by 3D quantification and proteomic analysis. Plant Physiol 179: 329-347. Article

 

2018

 

Ashnest, JR and Gendall, AR (2018) Trafficking to the seed protein storage vacuole. Functional Plant Biology, early access online. Article 

 

Barbara Hufnagel, Claudia Teixeira Guimaraes, Eric J. Craft, Jon E. Shaff, Robert E. Schaffert, Leon V. Kochian, Jurandir Vieira Magalhaes. 2018. Exploiting sorghum genetic diversity for enhanced aluminum tolerance: Allele mining based on the AltSB locus. Scientific Reports 8:1-13.  Article 

 

Dragwidge JM, Ford BA, Ashnest JR, Das P and Gendall AR (2018) Two endosomal NHX-type Na+/H+antiporters are involved in auxin mediated development in Arabidopsis thalianaPlant and Cell Physiology 59 (8) 1660-1669.  Article

 

Fourmaux, S; Kieffer, JC; Hallin, E. 2018. Laser Wakefield driven x-ray sources in Canada: a brilliant future for agriculture and global food security. Advances in X-Ray/EUV Optics and Components XIII 10760: 107600E. Article.

 

Fourmaux, S; Lassonde, P; Kieffer, JC; Théberge, F; Châteauneuf, M; Hallin, E. 2018. Radiation generation via nonlinear optical processes during propagation of high peak and high average power fs pulses. 20th International Conference and School on Quantum Electronics: Laser Physics and Applications 11047: 1104718-19. Article.

 

J. Rojek, M. Kapusta, M. Kozieradzka-Kiszkurno, M. Górniak, D. Majcher, T.F. Sharbel, J. Bohdanowicz.  2018.  Evidence for acquisition of apomixis during sexual reproduction in diploid Boechera stricta (Brassicaceae).  Ann Bot. 2018 Sep; 122(4): 513–539.  Published online 2018 Jul 6. doi :  [10.1093/aob/mcy114]. Article

 

Jurandir V. Magalhaes, Miguel A. Pineros, Laiane S. Maciel, Leon V. Kochian. 2018. Emerging pleiotropic mechanisms underlying aluminum resistance and phosphorus acquisition on acid soils. Frontiers ion Plant Science 9: 1-12. Article

 

Kieffer, Jean-Claude; Fourmaux, Sylvain; Hallin, Emil. 2018. High peak power lasers at INRS and application of laser Wakefield-based x-ray sources to global food security HM3A-2. Article.

 

Mei Ya Liu, He Qiang Lou, Wei Wei Chen, Miguel A. Piñeros, Jia Meng Xu, Wei Fan, Leon V. Kochian,  Jian Li Yang, Shao Jian Zheng. 2018. Two citrate transporters coordinately regulate citrate secretion from rice bean root tip under aluminum stress. Plant Cell and Environment 41: 809-822, Article

 

Song, Hao; Eramian, Mark; Hallin, Emil; Leyeza, Blanche; Arnison, Paul G; Rogge, Ronald. 2018. Robust and UserFriendly 3D Re-Construction of Neutron Tomographic Images. Applications of Computer Vision (WACV), 2018 IEEE Winter Conference, pp. 930-938. Article

 

Wei Wei Chen, Jian Feng Jin, He Qiang Lou, Li Liu, Leon V. Kochian, Jian Li Yang. 2018. LeSPL‑CNR negatively regulates Cd acquisition through repressing nitrate reductase‑mediated nitric oxide production in tomato. Article

 

Xingliang Ma, Martin Mau, Timothy F. Sharbel.  2018.  Genome Editing for Global Food Security.  Trends in Biotechnology.  Vol. 36, Issue 2, P123-127.Article

 

Ya Liu, He Qiang Lou, Wei Wei Chen, Miguel A. Piñeros, Jia Meng Xu, Wei Fan, Leon V. Kochian,  Jian Li Yang1, Shao Jian Zheng. 2018. Two citrate transporters coordinately regulate citrate secretion from rice bean root tip under aluminum stress. Plant Cell and Environment 41: 809-822. Article

 

Yusaku Uga, Ithipong Assaranurak, Yuka Kitomi, Brandon G. Larson, Eric J. Craft, Jon E. Shaff, Susan R. McCouch, Leon V. Kochian. 2018. Genomic regions responsible for seminal and crown root lengths identified by 2D & 3D root system image analysis. BMC Genomics 19: 273-284. Article

 

Zhang, Z., Zheng, Y., Ham, B.K., Zhang, S., Fei, Z., and Lucas, W.J. (2018). Plant lncRNAs are enriched in and move systemically through the phloem in response to phosphate deficiency. Journal of Integrative Plant Biology. https://doi.org/10.1111/jipb.12715. Article

 

Zhang, Y., Ma, X., Xie, X., Liu, Y-G., (2017). CRISPR/Cas9 Based Genome Editing in Plants. Progress in molecular biology and translational science. 149:133-150. Article

 

2017


Beatriz Navarro-Domínguez, Francisco J. Ruiz-Ruano, Josefa Cabrero, José María Corral, María Dolores López-León, Timothy F. Sharbel, and Juan Pedro M. Camacho. 2017. Not so silenced: B chromosomes contain active protein-coding genes. Scientific Reports. Scientific Reports 7 (April 3, 2017): 45200. Article

 

C.L. Scheriau, N.M. Nuerk, T.F. Sharbel, M.A. Koch.  2017.   Cryptic gene pools in the Hypericum perforatum-H. maculatum complex: diploid persistence versus trapped polyploid melting.  Ann. Bot.  Ann Bot. 2017 Nov 28;120(6):955-966. doi: 10.1093/aob/mcx110. Article

 

Jiapei Yan, Ju-Chen Chia, Huajin Sheng, Ha-il Jung, Tetiana-Olena Zavodna, Lu Zhang, Rong Huang, Chen Jiao, Eric J. Craft, Zhangjun Fei, Leon V. Kochian, Olena K. Vatamaniuk. 2017. Arabidopsis pollen fertility requires the transcription factors CITF1 and SPL7 that regulate copper delivery to anthers and jasmonic acid synthesis. Plant Cell 9: 3012–3029. Article

 

Jiang F, Wang T, Wang Y, Kochian LV, Chen F, Liu J. 2017. Identification and characterization of suppressor mutants of stop1. BMC Plant Biol 17: 128-137. Article

 

John T. Lovell, Robert J. Williamson, Stephen I. Wright, John K. McKay, Timothy F. Sharbel. 2017. Mutation accumulation in an asexual relative of Arabidopsis. PloS Genetics. Article

 

Kieffer, JC; Fourmaux, S; Hallin, E; Arnison, P; Brereton, N; Pitre, F; Dixon, M; Tran, N. 2017. Application of laser Wakefield-based x-ray source to global food security issues. 10239: 1023906-1023909.

 

Otto, Lars-Gernot, Mondal, Prodyut, Brassac, Jonathan, Preiss, Susanne, Degenhardt, Jörg, Sang, He, Reif, Jochen Christoph and Sharbel, Timothy Francis. 2017. Use of genotyping-by-sequencing to determine the genetic structure in the medicinal plant chamomile, and to identify flowering time and alpha-bisabolol associated SNP-loci by genome-wide association mapping. BMC Genomics 18:599. Article

 

P. Šarhanová, T. F. Sharbel, M. Sochor, R. J. Vašut, M. Dančák, B. Trávníček. 2017. Hybridization drives evolution of apomicts in Rubus subgenus Rubus – evidence from microsatellite markers. Annals of Botany (DOI: 10.1093/aob/mcx033). Article

 

Rupak Doshi, Aaron P. McGrath, Miguel Piñeros, Paul Szewczyk, Denisse M. Garza,  Geoffrey Chang and Leon V. Kochian. 2017. Functional characterization and discovery of modulators of SbMATE, the agronomically important aluminum tolerance transporter from Sorghum bicolor. Scientific Reports 7: Article Number: 17996. Article

 

Wang Y, Li R, Li D, Jia X, Zhou D, Li J, Ly SM, Hou S, Huang Y, Liu J, Kochian LV. 2017. NIP1;2 is a plasma membrane-localized transporter mediating aluminum uptake, translocation, and tolerance in Arabidopsis. Proc Natl Acad Sci USA 114: 5047-5052. Article

 

Xie, X., Ma, X., Zhu, Q., et al., (2017). CRISPR-GE: A Convenient Software Toolkit for CRISPR-Based Genome Editing. Molecular Plant. 10(9): 1246-1249. Article

 

Zhang, Y., Ma, X., Xie, X., Liu, Y-G., (2017). CRISPR/Cas9 Based Genome Editing in Plants. Progress in molecular biology and translational science. 149:133-150. Article

 

 

*Names highlighted in bold represent GIFS members.